Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs6981352 | chr8:10968600 | G/A | SGK223 | chr8:8175258-8244008:- | 0.39 | 7.1 | 4.55E-12 | Box Plot |
| THCA | rs6981461 | chr8:11794962 | T/C | SGK223 | chr8:8175258-8244008:- | 0.41 | 7.54 | 2.42E-13 | Box Plot |
| THCA | rs6981523 | chr8:11061792 | C/T | SGK223 | chr8:8175258-8244008:- | 0.48 | 9.21 | 1.05E-18 | Box Plot |
| THCA | rs6981733 | chr8:11784326 | T/C | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.55 | 1.45E-10 | Box Plot |
| THCA | rs6982308 | chr8:10193772 | C/G | SGK223 | chr8:8175258-8244008:- | 0.38 | 7.46 | 4.0E-13 | Box Plot |
| THCA | rs6982381 | chr8:10952500 | A/T | SGK223 | chr8:8175258-8244008:- | 0.43 | 8.03 | 7.65E-15 | Box Plot |
| THCA | rs6983680 | chr8:10901931 | A/G | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.11 | 2.12E-9 | Box Plot |
| THCA | rs6983727 | chr8:11415812 | A/G | SGK223 | chr8:8175258-8244008:- | -0.41 | -7.74 | 6.13E-14 | Box Plot |
| THCA | rs6984496 | chr8:10796093 | G/T | SGK223 | chr8:8175258-8244008:- | 0.34 | 6.66 | 7.53E-11 | Box Plot |
| THCA | rs6984759 | chr8:11139755 | C/G | SGK223 | chr8:8175258-8244008:- | -0.34 | -6.46 | 2.55E-10 | Box Plot |
| THCA | rs6985109 | chr8:10761585 | A/G | SGK223 | chr8:8175258-8244008:- | -0.37 | -7.17 | 2.94E-12 | Box Plot |
| THCA | rs6985146 | chr8:11170721 | A/C | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.7 | 5.82E-11 | Box Plot |
| THCA | rs6985460 | chr8:11171087 | A/C | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.85 | 2.31E-11 | Box Plot |
| THCA | rs6985792 | chr8:11795335 | T/C | SGK223 | chr8:8175258-8244008:- | -0.45 | -8.35 | 7.56E-16 | Box Plot |
| THCA | rs6986032 | chr8:11032240 | C/T | SGK223 | chr8:8175258-8244008:- | 0.5 | 9.75 | 1.33E-20 | Box Plot |